Processing of gene-nodes
(1) A new feature has been included: from the “Process” tab, under “Select Graph Elements”, a new button “Select Genes” is available. By clicking this command button, all nodes with type “gene” are added to the selection.
(2) It is now possible to replace gene identifier-labels with corresponding enzyme IDs. Also KO identifier labels may be changed to show enzyme IDs. By using the command “Nodes/Interpret Database-Identifiers”, and the new setting “KO/Gene ID >>> Enzyme IDs”, the KO database file will be processed and corresponding EC annotations are used to label the nodes. This approach works on the KO reference maps as well on non-EST organism-specific maps. For more details check the documentation page. Also keep in mind, that this new feature requires the download of the KEGG KO database file. Use the menu command “Help/Database Status” for download and license instructions.
A solution for EST based maps is not yet available.
News
12. Oktober 2006