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Disclaimer of Warranties: You acknowledge and agree that the use of KGML-ED is at your sole risk and that the entire risk as to satisfactory quality, performance, accuracy and effort is with you. It can not be guaranteed, that the functions contained in this software will meet your requirements, that the operation of KGML-ED will be uninterrupted or error-free, or that defects in the software will be corrected.
The libraries, listed below, where used during the development of KGML-ED. By using KGML-ED you need to accept and be aware of the terms and conditions of these licenses.
Important remark: The build-in KEGG functions limit or prohibit the commercial use of this software.
This application does not contain/distribute information from the KEGG website, but it contains functionality for the online-access to the KEGG (Web)Services. As a end-user you need to be aware of the KEGG license, in order to use this computer program.
SecondString
a open-source Java-based package of approximate string-matching techniques
University of Illinois/NCSA Open Source License
JRuby
a pure Java implementation of the Ruby interpreter
JRuby is free software released under a tri CPL/GPL/LGPL license.
Apache SOAP; Axis
A implementation of the SOAP submission to W3C; Axis is essentially a SOAP engine
Apache SOAP packages are made available under the Apache Software License
JavaMail
a platform-independent and protocol-independent framework to build mail and messaging applications
Copyright 1994-2005 Sun Microsystems, Inc.
JavaHelp
a full-featured, platform-independent, extensible help system
Copyright 2003 Sun Microsystems, Inc.
JCommon
a collection of useful classes used by JFreeChart, JFreeReport and other projects
JCommon is licensed under the terms of the GNU Lesser General Public Licence (LGPL).
KEGG libraries and SOAP access
KEGG - Kyoto Encyclopedia of Genes and Genomes (Kanehisa Laboratory of Kyoto University Bioinformatics Center)
Academic users may freely use the KEGG web site at http://www.genome.jp/kegg/. Non-academic users may also use the KEGG web site as end users, but any form of distribution requires a license agreement (see below).Non-academic users are requested to obtain a license agreement through the licensor, Pathway Solutions Inc., for installation of KEGG at their sites, for distribution or reselling of KEGG data, for software development and any other commercial activities that make use of KEGG, and also as end users of the third-party programs that access the KEGG ftp site.
Jakarta Commons
The Commons is a Jakarta subproject focused on all aspects of reusable Java components.
Apache License Version 2.0
CUP Parser Generator
LALR Parser Generator in Java - Version 11
CUP Parser Generator Copyright Notice, License, and DisclaimerCopyright 1996-1999 by Scott Hudson, Frank Flannery, C. Scott AnanianPermission to use, copy, modify, and distribute this software and its documentation for any purpose and without fee is hereby granted, provided that the above copyright notice appear in all copies and that both the copyright notice and this permission notice and warranty disclaimer appear in supporting documentation, and that the names of the authors or their employers not be used in advertising or publicity pertaining to distribution of the software without specific, written prior permission. The authors and their employers disclaim all warranties with regard to this software, including all implied warranties of merchantability and fitness. In no event shall the authors or their employers be liable for any special, indirect or consequential damages or any damages whatsoever resulting from loss of use, data or profits, whether in an action of contract, negligence or other tortious action, arising out of or in connection with the use or performance of this software.
BeanShell
BeanShell is a small, free, embeddable Java source interpreter with object scripting language features, written in Java.
BeanShell is dual licensed under both the SPL and LGPL. You may use and develop BeanShell under either license.
Enzyme Nomenclature Database (SIB)
we believe that the ENZYME database can be useful to anybody working with enzymes
This database is copyright from the Swiss Institute of Bioinformatics.There are no restrictions on its use by any institutions as long as its content is in no way modified.
JFreeChart
a free chart library for the Java(tm) platform
This library is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 2.1 of the License, or (at your option) any later version.